4W56

T4 Lysozyme L99A with sec-Butylbenzene Bound


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 4W56

Classification: HYDROLASE

Total Structure Weight: 20064.06

Macromolecule Entities
Molecule Chains Length Organism Details
Endolysin A 172 Escherichia virus t4 EC#: 3.2.1.17 IUBMB
Mutation: R12G, L99A, I137R
Gene Name(s): E
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EPE
Query on EPE

A 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
3GY
Query on 3GY

A (2R)-butan-2-ylbenzene
sec-Butylbenzene (Synonym)
C10 H14
ZJMWRROPUADPEA-SECBINFHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.63 Å
  • R-Value Free: 0.188
  • R-Value Work: 0.171
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 60.36 α = 90.00
b = 60.36 β = 90.00
c = 96.82 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-08-16
  • Released Date: 2015-04-01
  • Deposition author(s): Merski, M., Shoichet, B.K., Eidam, O., Fischer, M.

Revision History

  • Version 1_0: 2015-04-01

    Type: Initial release

  • Version 1_1: 2015-04-22

    Type: Database references

  • Version 1_2: 2015-05-06

    Type: Database references

  • Version 1_3: 2017-09-06

    Type: Author supporting evidence, Database references, Derived calculations, Other, Source and taxonomy

  • Version 1_4: 2017-11-22

    Type: Refinement description