Crystal structure of Cas9 bound to PAM-containing DNA target
DOI:10.2210/pdb4un3/pdb   NDB ID: NA3068
4UN3
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/dna/rna
    Structure Weight: 198182.77
    Molecule: SGRNA
    Polymer: 1 Type: rna Length: 83
    Chains: A
    Organism: synthetic construct
    Molecule: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1
    Polymer: 2 Type: protein Length: 1372
    Chains: B
    EC#: 3.1   
    Mutation: YES
    Organism: Streptococcus pyogenes
    Gene Names: cas9 csn1 SPy_1046
    UniProtKB: Search PDB | Q99ZW2   Protein Feature View
    Molecule: TARGET DNA STRAND
    Polymer: 3 Type: dna Length: 28
    Chains: C
    Organism: synthetic construct
    Molecule: NON-TARGET DNA STRAND
    Polymer: 4 Type: dna Length: 12
    Chains: D
    Organism: synthetic construct
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
    Polymer: 2
    Scientific Name: Streptococcus pyogenes   Taxonomy   Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
    Polymer: 4
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4UN4   CRYSTAL STRUCTURE OF CAS9 BOUND TO PAM-CONTAINING DNA TARGET WITH MISMATCHES AT POSITIONS 1-2 
    4UN5   CRYSTAL STRUCTURE OF CAS9 BOUND TO PAM-CONTAINING DNA TARGET CONTAINING MISMATCHES AT POSITIONS 1-3 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA3068
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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