4U28

Crystal structure of apo Phosphoribosyl isomerase A from Streptomyces sviceus ATCC 29083

Structural Biology Knowledgebase: 4U28 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.33 Å
  • R-Value Free: 0.151
  • R-Value Work: 0.127

Literature

Macromolecules
Sequence Display for 4U28

Classification: ISOMERASE

Total Structure Weight: 26129.82

Macromolecule Entities
Molecule Chains Length Organism Details
Phosphoribosyl isomerase A A 245 Streptomyces sviceus Gene Name(s): priA hisA SSEG_10012
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.33 Å
  • R-Value Free: 0.151
  • R-Value Work: 0.127
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 69.11 α = 90.00
b = 69.11 β = 90.00
c = 175.04 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-07-16
  • Released Date: 2014-07-30
  • Deposition author(s): Chang, C., Verduzco-Castro, E.A., Endres, M., Barona-Gomez, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2015-02-11
    Type: Other | Details: added TargetTrack and related
  • 2015-02-04
    Type: Biological assembly | Details: Biological assembly