4QN8

The crystal structure of an effector protein VipE from Legionella pneumophila subsp. pneumophila str. Philadelphia 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 4QN8

Classification: SIGNALING PROTEIN

Total Structure Weight: 52959.85

Macromolecule Entities
Molecule Chains Length Organism Details
VipE A, B, C 155 Legionella pneumophila Fragment: UNP residues 1-153
Gene Name(s): vipE lpg2813
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BME
Query on BME

A, B, C BETA-MERCAPTOETHANOL
C2 H6 O S
DGVVWUTYPXICAM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.190
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 77.55 α = 90.00
b = 77.55 β = 90.00
c = 72.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-06-17
  • Released Date: 2014-07-16
  • Deposition author(s): Tan, K., Xu, X., Cui, H., Liu, S., Savchenko, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release