X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNA
DOI:10.2210/pdb4qi2/pdb   NDB ID: NA3023
4QI2
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA Binding Protein/rna
    Structure Weight: 111672.72
    Molecule: Roquin-1
    Polymer: 1 Type: protein Length: 180
    Chains: A, B, C, D
    Fragment: ROQ domain
    Organism: Mus musculus
    Gene Names: Rc3h1 Gm551 Kiaa2025
    UniProtKB: Protein Feature View | Search PDB | Q4VGL6  
    Molecule: RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3')
    Polymer: 2 Type: rna Length: 23
    Chains: E, F, G, H
    Details: 23-mer, Tnf CDE RNA
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Mus musculus   Taxonomy   Common Name: Mouse Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4QI0   X-RAY STRUCTURE OF THE ROQ DOMAIN FROM MURINE ROQUIN-1 
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA3023
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Janowski, R.,  Schlundt, A.,  Sattler, M.,  Niessing, D.

    Deposition:   2014-05-30
    Release:   2014-07-16
    Last Modified (REVDAT):   2014-08-20
     
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    2014-08-20
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.00
    R-Value: 0.205 (obs.)
    R-Free: 0.247
    Space Group: P 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 56.56 α = 105.68 
    b = 60.41 β = 101.36 
    c = 84.37 γ = 95.72