4QI2

X-ray structure of the ROQ domain from murine Roquin-1 in complex with a 23-mer Tnf-CDE RNA

Structural Biology Knowledgebase: 4QI2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.203

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4QI2

Classification: RNA BINDING PROTEIN / RNA

Total Structure Weight: 111672.77


Macromolecule Entities
Molecule Chains Length Organism Details
Roquin-1 A, B, C, D 180 Mus musculus EC#: 5.2.1.8 IUBMB
Fragment: ROQ domain
Gene Name(s): Rc3h1 Gm551 Kiaa2025
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*AP*CP*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3') E, F, G, H 23 synthetic 23-mer, Tnf CDE RNA


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.203
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 56.56 α = 105.68
b = 60.41 β = 101.36
c = 84.37 γ = 95.72

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-05-30
  • Released Date: 2014-07-16
  • Deposition author(s): Janowski, R., Schlundt, A., Sattler, M., Niessing, D.

Revision History

  • 2014-08-20
    Type: Citation | Details: Citation update