4P3Y

Crystal structure of Acinetobacter baumannii DsbA in complex with EF-Tu


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.170

Literature

Macromolecules
Sequence Display for 4P3Y

Classification: TRANSLATION / OXIDOREDUCTASE

Total Structure Weight: 64504.57

Macromolecule Entities
Molecule Chains Length Organism Details
Elongation factor Tu A 394 Escherichia coli
Thiol:disulfide interchange protein B 182 Acinetobacter baumannii Fragment: UNP residues 27-205
Gene Name(s): dsbA ABAYE3833
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.170
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 74.32 α = 90.00
b = 78.19 β = 90.00
c = 122.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-03-10
  • Released Date: 2014-06-18
  • Deposition author(s): Premkumar, L., Martin, J.L.

Revision History

  • 2014-08-06
    Type: Database references