4OK7

Structure of bacteriophage SPN1S endolysin from Salmonella typhimurium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 4OK7

Classification: HYDROLASE

Total Structure Weight: 76527.18

Macromolecule Entities
Molecule Chains Length Organism Details
Endolysin A, B, C 223 Salmonella virus spn1s Gene Name(s): SPN1S_0028
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.208
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 54.62 α = 90.00
b = 120.60 β = 90.00
c = 126.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-22
  • Released Date: 2014-03-19
  • Deposition author(s): Park, Y., Lim, J., Kong, M., Ryu, S., Rhee, S.

Revision History

  • Version 1_0: 2014-03-19

    Type: Initial release

  • Version 1_1: 2014-04-30

    Type: Database references

  • Version 1_2: 2017-11-22

    Type: Refinement description