4OJU

Crystal structure of a leucine-rich repeat protein (BACCAP_00569) from Bacteroides capillosus ATCC 29799 at 2.00 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.190
  • R-Value Work: 0.167

Literature

Macromolecules
Sequence Display for 4OJU

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 65741.65

Macromolecule Entities
Molecule Chains Length Organism Details
hypothetical leucine rich repeat protein A, B, C, D 148 Pseudoflavonifractor capillosus Gene Name(s): BACCAP_00569
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B, C, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 57.63 α = 90.00
b = 108.16 β = 90.00
c = 108.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-21
  • Released Date: 2014-06-18
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

  • Version 1_0: 2014-06-18

    Type: Initial release

  • Version 1_1: 2014-12-24

    Type: Structure summary

  • Version 1_2: 2017-11-22

    Type: Refinement description