4OBV

Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (alpha-FMT)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.84 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 4OBV

Classification: LYASE

Total Structure Weight: 222652.80

Macromolecule Entities
Molecule Chains Length Organism Details
Pyridoxal-dependent decarboxylase domain protein A, B, C, D 490 [ruminococcus] gnavus Gene Name(s): RUMGNA_01526
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3SO
Query on 3SO

A, B, D {5-hydroxy-4-[(1E)-4-(1H-indol-3-yl)-3-oxobut- 1-en-1-yl]-6-methylpyridin-3-yl}methyl dihydrogen phosphate
C19 H19 N2 O6 P
UHCJSBYGRGJECF-VOTSOKGWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
2SU
Query on 2SU

A, B, C, D alpha-(fluoromethyl)-D-tryptophan
C12 H13 F N2 O2
BZEQVHKJCVLJMC-LBPRGKRZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.84 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.210
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 135.03 α = 90.00
b = 135.03 β = 90.00
c = 249.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-01-07
  • Released Date: 2014-10-29
  • Deposition author(s): Fraser, J.S., Van Benschoten, A.H.

Revision History

  • Version 1_0: 2014-10-29

    Type: Initial release