4MYO

Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.254
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 4MYO

Classification: TRANSFERASE

Total Structure Weight: 73650.44

Macromolecule Entities
Molecule Chains Length Organism Details
Virginiamycin A acetyltransferase A, B, C 214 Staphylococcus aureus EC#: 2.3.1 IUBMB
Gene Name(s): vat
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B, C CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 91.84 α = 90.00
b = 184.04 β = 90.00
c = 96.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-09-27
  • Released Date: 2013-10-16
  • Deposition author(s): Stogios, P.J., Minasov, G., Dong, A., Evdokimova, E., Yim, V., Krishnamoorthy, M., Di Leo, R., Courvalin, P., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)
  • Previous versions: 4E8L

Revision History

  • 2014-09-24
    Type: Database references
  • 2014-12-24
    Type: Database references