4ME8

Crystal structure of a signal peptidase I (EF3073) from Enterococcus faecalis V583 at 2.27 A resolution

Structural Biology Knowledgebase: 4ME8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 4ME8

Classification: HYDROLASE

Total Structure Weight: 17286.13

Macromolecule Entities
Molecule Chains Length Organism Details
Signal peptidase I A 151 Enterococcus faecalis EC#: 3.4.21.89 IUBMB
Gene Name(s): EF_3073
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 37.49 α = 90.00
b = 37.49 β = 90.00
c = 169.05 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-25
  • Released Date: 2013-09-11
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

No revisions since initial release