4MAE

Methanol dehydrogenase from Methylacidiphilum fumariolicum SolV

Structural Biology Knowledgebase: 4MAE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4MAE

Classification: OXIDOREDUCTASE

Total Structure Weight: 131302.58

Macromolecule Entities
Molecule Chains Length Organism Details
Methanol dehydrogenase A, B 577 Methylacidiphilum fumariolicum EC#: 1.1.2.7 IUBMB 1.1.2.8 IUBMB
Fragment: UNP residues 35-611
Gene Name(s): mxaF MFUM_190005
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
15P
Query on 15P

A, B POLYETHYLENE GLYCOL (N=34)
PEG 1500 (Synonym)
C69 H140 O35
VUYXVWGKCKTUMF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PQQ
Query on PQQ

A, B PYRROLOQUINOLINE QUINONE
C14 H6 N2 O8
MMXZSJMASHPLLR-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CE
Query on CE

A, B CERIUM (III) ION
Ce
XQTIWNLDFPPCIU-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.161
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 55.70 α = 90.00
b = 75.50 β = 97.60
c = 136.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-16
  • Released Date: 2013-09-18
  • Deposition author(s): Pol, A.J., Barends, T.R.M., Dietl, A., Khadem, A.F., Eygenstein, J., Jetten, M.S.M., Op den Camp, H.J.M.

Revision History

  • 2014-01-29
    Type: Citation | Details: Citation update
  • 2013-10-02
    Type: Citation | Details: Citation update