4LVY

Structure of the THF riboswitch bound to pemetrexed

Structural Biology Knowledgebase: 4LVY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 4LVY

Classification: RNA

Total Structure Weight: 29704.17

Macromolecule Entities
Molecule Chains Length Organism Details
THF riboswitch A 89 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
LYA
Query on LYA

A 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3- D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID
LY231514 (Synonym)
C20 H21 N5 O6
WBXPDJSOTKVWSJ-ZDUSSCGKSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.210
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 27.37 α = 90.00
b = 68.44 β = 90.00
c = 155.83 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2013-07-26
  • Released Date: 2014-03-19
  • Deposition author(s): Trausch, J.J., Batey, R.T.

Revision History

No revisions since initial release