Structure of the THF riboswitch bound to pemetrexed
DOI:10.2210/pdb4lvy/pdb   NDB ID: NA2642
4LVY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA
    Structure Weight: 29704.13
    Molecule: THF riboswitch
    Polymer: 1 Type: rna Length: 89
    Chains: A
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3SD3    
    4LVV    
    4LVW    
    4LVZ    
    4LW0    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    LYA
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    LYA C20 H21 N5 O6
    2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3- D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC ACID
    LYA:4LVY
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2642
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Trausch, J.J.,  Batey, R.T.

    Deposition:   2013-07-26
    Release:   2014-03-19
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.00
    R-Value: 0.212 (obs.)
    R-Free: 0.242
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 27.37 α = 90.00 
    b = 68.44 β = 90.00 
    c = 155.83 γ = 90.00