4KTQ

BINARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM T. AQUATICUS BOUND TO A PRIMER/TEMPLATE DNA

Structural Biology Knowledgebase: 4KTQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.227

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KTQ

Classification: TRANSFERASE / DNA

Total Structure Weight: 68508.56


Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (LARGE FRAGMENT OF DNA POLYMERASE I) A 539 Thermus aquaticus EC#: 2.7.7.7 IUBMB
Gene Name(s): polA pol1
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3') B 12 synthetic
DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') C 13 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
DOC
Query on DOC
B DNA LINKING C9 H14 N3 O6 P DC

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.227
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 110.84 α = 90.00
b = 110.84 β = 90.00
c = 90.84 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-09-09
  • Released Date: 1999-01-13
  • Deposition author(s): Li, Y., Waksman, G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4