4KQ9

Crystal structure of periplasmic ribose ABC transporter from Conexibacter woesei DSM 14684

Structural Biology Knowledgebase: 4KQ9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 4KQ9

Classification: TRANSPORT PROTEIN

Total Structure Weight: 31943.98

Macromolecule Entities
Molecule Chains Length Organism Details
Ribose ABC transporter, substrate binding protein A 299 Conexibacter woesei Mutation: V261M
Gene Name(s): Cwoe_4347
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.190
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.47 α = 90.00
b = 60.54 β = 90.00
c = 88.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-14
  • Released Date: 2013-05-29
  • Deposition author(s): Nocek, B., Chhor, G., Endres, M., Babnigg, G., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release