4KE6

Crystal structure D196N mutant of Monoglyceride lipase from Bacillus sp. H257 in complex with 1-rac-lauroyl glycerol

Structural Biology Knowledgebase: 4KE6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.200

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KE6

Classification: HYDROLASE

Total Structure Weight: 178105.92

Macromolecule Entities
Molecule Chains Length Organism Details
Thermostable monoacylglycerol lipase A, B, C..., D, E, FA, B, C, D, E, F 270 Bacillus sp. h-257 EC#: 3.1.1.23 IUBMB
Mutation: D196N
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1QW
Query on 1QW

A (2R)-2,3-dihydroxypropyl dodecanoate
1-Lauroyl-rac-glycerol (Synonym)
C15 H30 O4
ARIWANIATODDMH-CQSZACIVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MPD
Query on MPD

C, E, F (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.200
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.19 α = 90.00
b = 182.88 β = 90.00
c = 248.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-25
  • Released Date: 2013-09-18
  • Deposition author(s): Rengachari, S., Aschauer, P., Gruber, K., Dreveny, I., Oberer, M.

Revision History

  • 2013-11-20
    Type: Citation | Details: Citation update
  • 2013-10-09
    Type: Citation | Details: Citation update