4KDI

Crystal structure of p97/VCP N in complex with OTU1 UBXL

Structural Biology Knowledgebase: 4KDI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.214

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KDI

Classification: SIGNALING PROTEIN / HYDROLASE

Total Structure Weight: 63000.48

Macromolecule Entities
Molecule Chains Length Organism Details
Transitional endoplasmic reticulum ATPase A, B 193 Homo sapiens EC#: 3.6.4.6 IUBMB
Fragment: N domain (Residues 21-185)
Gene Name(s): VCP Gene View
Ubiquitin thioesterase OTU1 C, D 90 Saccharomyces cerevisiae EC#: 3.4.19.12 IUBMB
Fragment: UBX-like domain (Residues 1-73)
Gene Name(s): OTU1 YFL044C


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.86 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.214
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 42.82 α = 90.00
b = 88.61 β = 90.00
c = 143.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-25
  • Released Date: 2014-03-19
  • Deposition author(s): Kim, S.J., Kim, E.E.

Revision History

  • 2014-05-21
    Type: Citation | Details: Citation update