Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Primary Citation
  •   Molecular Description Hide
    Classification: Fluorescent Protein
    Structure Weight: 51674.49
    Molecule: Red fluorescent protein blFP-R5
    Polymer: 1 Type: protein Length: 228
    Chains: A, B
    Mutation: M1S
    Organism: Branchiostoma lanceolatum
    Gene Name: blFP-R5
    UniProtKB: Search PDB | B1PND0   Protein Feature View
  •   Structure Validation Hide

    View the full validation report  


  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Branchiostoma lanceolatum   Taxonomy   Common Name: Common lancelet Expression System: Escherichia coli  
  •   Related PDB Entries Hide
    Identifier Details
    2DD7   Marine copepod (Chiridius poppei) 
    2G3O   Wild type green fluorescent protein copGFP (Pontellidae plumata) 
    4HVF   Wild type green fluorescent protein lanGFP (Branchiostoma lanceolatum) 
    4JF9   Wild type red fluorescent protein lanRFP (Branchiostoma lanceolatum) 
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GOL C3 H8 O3
  •   Modified Residues Hide
    Identifier Formula Parent Type
    CR2 C13 H13 N3 O4 GLY, TYR, GLY lPeptideLinking
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Pletnev, V.Z.,  Pletneva, N.V.,  Pletnev, S.V.

    Deposition:   2013-03-01
    Release:   2013-09-18
  •   Revision History    Hide
    No revisions since initial release
  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   1.94
    R-Value: 0.157 (obs.)
    R-Free: 0.198
    Space Group: P 64 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 133.76 α = 90.00 
    b = 133.76 β = 90.00 
    c = 156.96 γ = 120.00