4JES

1.6A resolution Apo structure of the hemophore HasA from Yersinia pestis (Hexagonal Form)

Structural Biology Knowledgebase: 4JES SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.190
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4JES

Classification: HEME BINDING PROTEIN TRANSPORT PROTEIN

Total Structure Weight: 43287.70

Macromolecule Entities
Molecule Chains Length Organism Details
Hemophore HasA A, B 193 Yersinia pestis

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MLI
Query on MLI

A, B MALONATE ION
C3 H2 O4
OFOBLEOULBTSOW-UHFFFAOYSA-L
Ligand Explorer
 
JSmol
NA
Query on NA

B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
P6G
Query on P6G

A, B HEXAETHYLENE GLYCOL
POLYETHYLENE GLYCOL PEG400 (Synonym)
C12 H26 O7
IIRDTKBZINWQAW-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
TAM
Query on TAM

B TRIS(HYDROXYETHYL)AMINOMETHANE
C7 H17 N O3
GKODZWOPPOTFGA-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.190
  • R-Value Work: 0.161
  • Space Group: P 63
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 75.07 α = 90.00
b = 75.07 β = 90.00
c = 129.26 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-27
  • Released Date: 2013-04-24
  • Deposition author(s): Kumar, R., Lovell, S., Battaile, K.P., Rivera, M.

Revision History

  • 2013-05-29
    Type: Citation | Details: Citation update