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The 1.9A crystal structure of humanized Xenopus Mdm2 with nutlin-3a
4J3E
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Ligase/antagonist
    Structure Weight: 10640.26
    Molecule: E3 ubiquitin-protein ligase Mdm2
    Polymer: 1 Type: protein Length: 86
    Chains: A
    EC#: 6.3.2   
    Fragment: N-terminal domain (UNP residues 21-105)
    Mutation: I50L, P92H, L95I
    Organism: Xenopus laevis
    Gene Name: mdm2
    UniProtKB: Protein Feature View | Search PDB | P56273  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Xenopus laevis   Taxonomy   Common Name: Clawed frog,common platanna,platanna Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1RV1  HUMAN MDM2 COMPLEXED WITH NUTLIN-2 
    4IPF  SAME PROTEIN COMPLEXED WITH RO5045337 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NUT
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    NUT C30 H30 Cl2 N4 O4
    4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4- methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro- 1H-imidazol-1-yl}carbonyl)piperazin-2-one
    SO4
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    SO4 O4 S
    SULFATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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