4I4B

HMG-CoA Reductase from Pseudomonas mevalonii complexed with NAD and intermediate hemiacetal form of HMG-CoA

Structural Biology Knowledgebase: 4I4B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.178

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4I4B

Classification: OXIDOREDUCTASE

Total Structure Weight: 93413.12

Macromolecule Entities
Molecule Chains Length Organism Details
3-hydroxy-3-methylglutaryl-coenzyme A reductase A, B 428 Pseudomonas mevalonii EC#: 1.1.1.88 IUBMB
Gene Name(s): mvaA

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1CO
Query on 1CO

B (3S)-3-hydroxy-3-methyl-5-sulfanylpentanoic acid
C6 H12 O3 S
MCHPXVGJHBKMNR-ZCFIWIBFSA-N
Ligand Explorer
 
JSmol
1CV
Query on 1CV

A (3R,5R,9R,19R,21S)-1-[(2R,3S,4R,5R)-5-(6- amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran- 2-yl]-3,5,9,21-tetrahydroxy-8,8,21-trimethyl- 10,14-dioxo-19-sulfanyl-2,4,6-trioxa-18-thia- 11,15-diaza-3,5-diphosphatricosan-23-oic acid 3,5- dioxide
C27 H46 N7 O19 P3 S2
YDFKRXILVYQATJ-NLYQEGKRSA-N
Ligand Explorer
 
JSmol
GOL
Query on GOL

A, B GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
NAD
Query on NAD

B NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.178
  • Space Group: I 41 3 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 226.08 α = 90.00
b = 226.08 β = 90.00
c = 226.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-27
  • Released Date: 2013-07-17
  • Deposition author(s): Stauffacher, C.V., Steussy, C.N., Critchelow, C.J., Schmidt, T., Min, J., Wrensford, L.V., Burgner, J.W., Rodwell, V.W.

Revision History

  • 2013-12-25
    Type: Citation | Details: Citation update
  • 2013-08-07
    Type: Citation | Details: Citation update