4HP2

Invariom refinement of a new dimeric monoclinic 2 solvate of thiostrepton at 0.64 angstrom resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.64 Å
  • R-Value Observed: 0.068

Literature

Macromolecules
Sequence Display for 4HP2

Classification: ANTIBIOTIC

Total Structure Weight: 4641.45

Macromolecule Entities
Molecule Chains Length Organism Details
Thiostrepton A, B 19 Streptomyces azureus Fragment: UNP RESIDUES 56-72
Gene Name(s): tpdA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ETZ
Query on ETZ

A, B diethyl ether
C4 H10 O
RTZKZFJDLAIYFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMF
Query on DMF

A, B DIMETHYLFORMAMIDE
C3 H7 N O
ZMXDDKWLCZADIW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000223
Query on PRD_000223
A, B THIOSTREPTON Thiopeptide /
Antibiotic
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.64 Å
  • R-Value Observed: 0.068
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 21.39 α = 90.00
b = 22.87 β = 106.45
c = 22.78 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-23
  • Released Date: 2013-10-02
  • Deposition author(s): Proepper, K., Holstein, J.J., Huebschle, C.B., Bond, C.S., Dittrich, B.

Revision History

  • Version 1_0: 2013-10-02

    Type: Initial release