4GPI

Crystal structure of human B type phosphoglycerate mutase

Structural Biology Knowledgebase: 4GPI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GPI

Classification: Isomerase hydrolase

Total Structure Weight: 59870.13

Macromolecule Entities
Molecule Chains Length Organism Details
Phosphoglycerate mutase 1 B, C 262 Homo sapiens EC#: 3.1.3.13 IUBMB 5.4.2.11 IUBMB 5.4.2.4 IUBMB
Gene Name(s): PGAM1 Gene View PGAMA CDABP0006

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.08 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.190
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 81.66 α = 90.00
b = 80.26 β = 90.00
c = 89.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-21
  • Released Date: 2013-05-22
  • Deposition author(s): Zhou, L., He, C.

Revision History

No revisions since initial release