4GO0

Crystal structure of the c707s mutant of c-terminal domain of 10'formyltetrahydrofolate dehydrogenase in complex with NADPH

Structural Biology Knowledgebase: 4GO0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.38 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.195

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GO0

Classification: oxidoreductase

Total Structure Weight: 229406.02

Macromolecule Entities
Molecule Chains Length Organism Details
Cytosolic 10-formyltetrahydrofolate dehydrogenase A, B, C, D 517 Rattus norvegicus EC#: 1.5.1.6 IUBMB
Fragment: C-terminal domain, residues 397-902
Mutation: C707S
Gene Name(s): Aldh1l1 Fthfd

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDP
Query on NDP

A, B, C, D NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.38 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.195
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 258.42 α = 90.00
b = 194.13 β = 108.82
c = 96.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-17
  • Released Date: 2013-01-23
  • Deposition author(s): Tsybovsky, Y.

Revision History

  • 2013-05-22
    Type: Citation | Details: Citation update