4GCF

Room temperature X-ray diffraction study of a 6-fold molar excess of a cisplatin/carboplatin mixture binding to HEWL, Dataset 4

Structural Biology Knowledgebase: 4GCF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.169

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GCF

Classification: HYDROLASE

Total Structure Weight: 14799.55

Macromolecule Entities
Molecule Chains Length Organism Details
Lysozyme C A 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Fragment: UNP residues 19-147
Gene Name(s): LYZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PT
Query on PT

A PLATINUM (II) ION
Pt
HRGDZIGMBDGFTC-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMS
Query on DMS

A DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.169
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 79.87 α = 90.00
b = 79.87 β = 90.00
c = 37.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-30
  • Released Date: 2013-01-02
  • Deposition author(s): Helliwell, J.R., Tanley, S.W.M.

Revision History

  • 2013-01-23
    Type: Citation | Details: Citation update