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X-ray structure of PI3K-gamma bound to a 4-(morpholin-4-yl)- (6-oxo-1,6-dihydropyrimidin-2-yl)amide inhibitor
4G11
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/transferase Inhibitor
    Structure Weight: 111042.34
    Molecule: Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
    Polymer: 1 Type: protein Length: 966
    Chains: A
    EC#: 2.7.1.153    2.7.11.1   
    Fragment: UNP residues 144-1102
    Organism: Homo sapiens
    Gene Name: Gene View for PIK3CG
    UniProtKB: Protein Feature View | Search PDB | P48736  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    0W7
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    0W7 C16 H18 N4 O3
    2-[4-(morpholin-4-yl)-6-oxo-1,6-dihydropyrimidin- 2-yl]-N-phenylacetamide
    0W7:4G11
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    0W7
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    0W7
    IC50: >10000 nM (100) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Morales, R.

    Deposition:   2012-07-10
    Release:   2012-11-14
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.40
    R-Value: 0.285 (obs.)
    R-Free: 0.349
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 140.63 α = 90.00 
    b = 67.38 β = 96.14 
    c = 105.89 γ = 90.00