4G0X

Crystal Structure of Arabidopsis thaliana AGO1 MID domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.162

Literature

Macromolecules
Sequence Display for 4G0X

Classification: GENE REGULATION

Total Structure Weight: 17153.95

Macromolecule Entities
Molecule Chains Length Organism Details
Protein argonaute 1 A 147 Arabidopsis thaliana Fragment: MID domain, UNP residues 593-738
Gene Name(s): AGO1 Gene View At1g48410 F11A17.3 T1N15.2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.35 Å
  • R-Value Free: 0.179
  • R-Value Work: 0.162
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 37.25 α = 90.00
b = 60.97 β = 90.00
c = 67.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-10
  • Released Date: 2012-07-25
  • Deposition author(s): Frank, F., Hauver, J., Sonenberg, N., Nagar, B.

Revision History

  • 2012-08-29
    Type: Database references
  • 2012-09-12
    Type: Database references