4FQQ

Crystal Structure of Germline Antibody PGT121-GL Fab

Structural Biology Knowledgebase: 4FQQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.42 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4FQQ

Classification: IMMUNE SYSTEM

Total Structure Weight: 197598.78

Macromolecule Entities
Molecule Chains Length Organism Details
Fab light chain A, C, E, L 215 Homo sapiens Gene Name(s): IGL@
Fab heavy chain B, D, F, H 244 Homo sapiens Gene Name(s): IGH@

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

D, L SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.42 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.194
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 54.93 α = 90.00
b = 344.74 β = 91.95
c = 55.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-06-25
  • Released Date: 2012-11-14
  • Deposition author(s): Scharf, L., Bjorkman, P.J.

Revision History

  • 2012-12-12
    Type: Citation | Details: Citation update