4FQI

Crystal Structure of Fab CR9114 in Complex with a H5N1 influenza virus hemagglutinin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.198

Literature

Macromolecules
Sequence Display for 4FQI

Classification: VIRAL PROTEIN / IMMUNE SYSTEM

Total Structure Weight: 107506.77

Macromolecule Entities
Molecule Chains Length Organism Details
Hemagglutinin HA1 A 334 Influenza a virus Fragment: UNP residues 17-346
Gene Name(s): HA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Hemagglutinin HA2 B 177 Influenza a virus Fragment: UNP residues 347-520
Gene Name(s): HA
antibody CR9114 heavy chain H 230 Homo sapiens Fragment: Fab
antibody CR9114 light chain L 216 Homo sapiens Fragment: Fab Lambda

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B, H 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.71 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.198
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 141.64 α = 90.00
b = 141.64 β = 90.00
c = 382.92 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-06-25
  • Released Date: 2012-08-22
  • Deposition author(s): Dreyfus, C., Wilson, I.A.

Revision History

  • 2012-10-03
    Type: Database references