4EVM

1.5 Angstrom crystal structure of soluble domain of membrane-anchored thioredoxin family protein from Streptococcus pneumoniae strain Canada MDR_19A

• PDB DOI: https://doi.org/10.2210/pdb4EVM/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Streptococcus pneumoniae
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2012-04-26 Released: 2012-05-09 
• Deposition Author(s): Wawrzak, Z., Stogios, P.J., Minasov, G., Kudritska, M., Yim, V., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.51 Å
• R-Value Free: 0.198 
• R-Value Work: 0.169 
• R-Value Observed: 0.170 

Literature

1.5 Angstrom crystal structure of soluble domain of membrane-anchored thioredoxin family protein from Streptococcus pneumoniae strain Canada MDR_19A

Wawrzak, Z., Stogios, P.J., Minasov, G., Kudritska, M., Yim, V., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 15.52 kDa 
• Atom Count: 1,415 
• Modelled Residue Count: 138 
• Deposited Residue Count: 138 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Thioredoxin family protein	A	138	Streptococcus pneumoniae	Mutation(s): 0  Gene Names: SpneCM_010100000757, SP_0659 EC: 1.8.4
UniProt
Find proteins for A0A0H2UP26 (Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)) Explore A0A0H2UP26  Go to UniProtKB:  A0A0H2UP26

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.51 Å
• R-Value Free: 0.198 
• R-Value Work: 0.169 
• R-Value Observed: 0.170 
• Space Group: P 4₃ 2₁ 2
• Diffraction Data: https://doi.org/10.18430/M34EVM

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 63.247	α = 90
b = 63.247	β = 90
c = 89.872	γ = 90

Software Package:

Software Name	Purpose
HKL-3000	data collection
BALBES	phasing
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2012-05-09 
Deposition Author(s): Wawrzak, Z., Stogios, P.J., Minasov, G., Kudritska, M., Yim, V., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History  

• Version 1.0: 2012-05-09
  Type: Initial release
  
• Version 1.1: 2023-09-13
  Changes: Data collection, Database references, Refinement description