4E3X

Crystal Structure of Mus musculus 1-pyrroline-5-carboxylate dehydrogenase cryoprotected in proline


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.24 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 4E3X

Classification: OXIDOREDUCTASE

Total Structure Weight: 125158.90

Macromolecule Entities
Molecule Chains Length Organism Details
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial A, B 563 Mus musculus EC#: 1.2.1.88 IUBMB
Mutation: T33A, M61T, Q468K
Gene Name(s): Aldh4a1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
16P
Query on 16P

A 3,6,9,12,15,18-HEXAOXAICOSANE
C14 H30 O6
IXFAFGFZFQHRLB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PGE
Query on PGE

A TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PRO
Query on PRO

A, B PROLINE
C5 H9 N O2
ONIBWKKTOPOVIA-BYPYZUCNSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.24 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.155
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 84.98 α = 90.00
b = 93.88 β = 90.00
c = 132.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-10
  • Released Date: 2012-07-25
  • Deposition author(s): Tanner, J.J., Pemberton, T.A.

Revision History

  • 2012-08-29
    Type: Database references