4E27

Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences Solved by Iodide SAD Phasing

Structural Biology Knowledgebase: 4E27 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4E27

Classification: VIRAL PROTEIN

Total Structure Weight: 96355.33

Macromolecule Entities
Molecule Chains Length Organism Details
Capsid Protein A, B, C, D, E 175 Unidentified

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IOD
Query on IOD

A, B, C, D, E IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.202
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 135.71 α = 90.00
b = 68.36 β = 93.69
c = 107.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-07
  • Released Date: 2013-03-27
  • Deposition author(s): Craig, T.K., Abendroth, J., Lorimer, D., Burgin Jr, A.B., Segall, A., Rohwer, F.

Revision History

  • 2015-04-01
    Type: Secondary structure | Details: --