4DC6

Crystal Structure of Thaumatin Exposed to Excessive SONICC Imaging Laser Dose.

Structural Biology Knowledgebase: 4DC6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.178

Literature

Macromolecules
Sequence Display for 4DC6

Classification: PLANT PROTEIN

Total Structure Weight: 22620.41

Macromolecule Entities
Molecule Chains Length Organism Details
Thaumatin I A 207 Thaumatococcus daniellii Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TLA
Query on TLA

A L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.48 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.178
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.93 α = 90.00
b = 57.93 β = 90.00
c = 150.35 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-17
  • Released Date: 2013-01-23
  • Deposition author(s): Mulichak, A.M., Becker, M., Kissick, D.J., Keefe, L.J., Fischetti, R.F., Simpson, G.J.

Revision History

  • 2013-05-15
    Type: Citation | Details: Citation update