4C8Z

Cas6 (TTHA0078) product complex

Structural Biology Knowledgebase: 4C8Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.176

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4C8Z

Classification: HYDROLASE / RNA

Total Structure Weight: 62584.12


Macromolecule Entities
Molecule Chains Length Organism Details
CAS6A A, B 243 Thermus thermophilus Gene Name(s): TTHA0078
Macromolecule Entities
Molecule Chains Length Organism Details
R1 REPEAT RNA CLEAVAGE PRODUCT C 28 Thermus thermophilus R1 REPEAT RNA CLEAVAGE PRODUCT

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
23G
Query on 23G
C RNA OH 3 prime terminus C10 H13 N5 O10 P2 G

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.176
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 43.72 α = 90.00
b = 83.08 β = 100.65
c = 72.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-10-02
  • Released Date: 2013-11-06
  • Deposition author(s): Jinek, M., Niewoehner, O., Doudna, J.A.

Revision History

  • 2014-02-12
    Type: Citation | Details: JRNL
  • 2013-11-20
    Type: Atom nomenclature | Details: ATOM