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Cas6 (TTHA0078) substrate mimic complex
DOI:10.2210/pdb4c8y/pdb   NDB ID: NA2768
4C8Y
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA Binding Protein/rna
    Structure Weight: 58513.70
    Molecule: CAS6A
    Polymer: 1 Type: protein Length: 243
    Chains: A, B
    Organism: Thermus thermophilus HB8
    Gene Name: TTHA0078
    UniProtKB: Protein Feature View | Search PDB | Q5SM65  
    Molecule: R1 REPEAT RNA SUBSTRATE MIMIC
    Polymer: 2 Type: rna Length: 16
    Chains: C
    Fragment: REPEAT STEM-LOOP
    Details: R1 REPEAT RNA SUBSTRATE MIMIC
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Thermus thermophilus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4C8Z  CAS6 (TTHA0078) PRODUCT COMPLEX 
    4C97  CAS6 (TTHA0078) H37A MUTANT 
    4C98  THERMUS THERMOPHILUS CAS6 (TTHB231) 
    4C9D  CAS6 (TTHB231) PRODUCT COMPLEX 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    SO4
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    SO4 O4 S
    SULFATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2768
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Jinek, M.,  Niewoehner, O.,  Doudna, J.A.

    Deposition:   2013-10-02
    Release:   2013-11-06
    Last Modified (REVDAT):   2014-02-12
     
  •   Revision History    Hide
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    2014-02-12
    Citation
    2013-11-20
    Atom nomenclature
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.80
    R-Value: 0.192 (obs.)
    R-Free: 0.216
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 43.07 α = 90.00 
    b = 83.30 β = 101.41 
    c = 73.44 γ = 90.00