4BRS

Structure of wild type PhaZ7 PHB depolymerase

Structural Biology Knowledgebase: 4BRS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.170
  • R-Value Work: 0.132

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BRS

Classification: HYDROLASE

Total Structure Weight: 72831.52

Macromolecule Entities
Molecule Chains Length Organism Details
PHB DEPOLYMERASE PHAZ7 A, B 343 Paucimonas lemoignei EC#: 3.1.1.75 IUBMB
Gene Name(s): phaZ7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A, B SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.170
  • R-Value Work: 0.132
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.40 α = 90.00
b = 199.70 β = 114.20
c = 44.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-05
  • Released Date: 2013-09-18
  • Deposition author(s): Hermawan, S., Subedi, B., Papageorgiou, A.C., Jendrossek, D.

Revision History

  • 2013-12-25
    Type: Citation | Details: JRNL