4ASR
Crystal structure of ANCE in complex with Thr6-Bradykinin
- PDB DOI: https://doi.org/10.2210/pdb4ASR/pdb
- Classification: HYDROLASE
- Organism(s): Drosophila melanogaster, Homo sapiens
- Expression System: Komagataella phaffii GS115
- Mutation(s): Yes
- Deposited: 2012-05-02 Released: 2012-10-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.200
- R-Value Work: 0.183
- R-Value Observed: 0.184
This is version 2.1 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ANGIOTENSIN-CONVERTING ENZYME | 598 | Drosophila melanogaster | Mutation(s): 0 EC: 3.4.15.1 |  | |
UniProt | |||||
Find proteins for Q10714 (Drosophila melanogaster) Explore Q10714 Go to UniProtKB: Q10714 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q10714 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| BRADYKININ | B [auth P] | 9 | Homo sapiens | Mutation(s): 1 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01042 (Homo sapiens) Explore P01042 Go to UniProtKB: P01042 | |||||
PHAROS: P01042 GTEx: ENSG00000113889 | |||||
Entity Groups | |||||
| UniProt Group | P01042 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Oligosaccharides
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
| beta-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | C [auth B] | 6 |  | N-Glycosylation | |
Glycosylation Resources | |||||
GlyTouCan: G64803HZ GlyCosmos: G64803HZ GlyGen: G64803HZ | |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAG Query on NAG | E [auth A], F [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |  | ||
| FLC Query on FLC | G [auth A] | CITRATE ANION C6 H5 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-K |  | ||
| ZN Query on ZN | D [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.200
- R-Value Work: 0.183
- R-Value Observed: 0.184
- Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 173.292 | α = 90 |
| b = 173.292 | β = 90 |
| c = 101.458 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| TRUNCATE | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2012-10-31 Deposition Author(s): Akif, M., Masuyer, G., Sturrock, E.D., Isaac, R.E., Acharya, K.R.
Revision History (Full details and data files)
- Version 1.0: 2012-10-31
Type: Initial release - Version 1.1: 2012-12-05
Changes: Database references - Version 1.2: 2012-12-19
Changes: Database references - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Other, Structure summary - Version 2.1: 2023-12-20
Changes: Data collection, Database references, Refinement description, Structure summary
