4AKJ

Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered acylated insulin

Structural Biology Knowledgebase: 4AKJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AKJ

Classification: HORMONE

Total Structure Weight: 12238.57

Macromolecule Entities
Molecule Chains Length Organism Details
INSULIN A CHAIN A, C 21 Homo sapiens Gene Name(s): INS Gene View
INSULIN B CHAIN B, D 29 Homo sapiens Details: DELTA 30, CHAIN B MODIFIED AT LYS 29
Gene Name(s): INS Gene View

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
16E
Query on 16E

B N-(16-Carboxyhexadecanoyl)-L-glutamic acid
C21 H37 N O7
SGIVALYPXQHYAY-KRWDZBQOSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPH
Query on IPH

A, C PHENOL
C6 H6 O
ISWSIDIOOBJBQZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

B, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

B, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.196
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 78.72 α = 90.00
b = 78.72 β = 90.00
c = 40.55 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-23
  • Released Date: 2013-01-09
  • Deposition author(s): Steensgaard, D.B., Schluckebier, G., Strauss, H.M., Norrman, M., Thomsen, J.K., Friderichsen, A.V., Havelund, S., Jonassen, I.

Revision History

  • 2013-01-30
    Type: Citation | Details: JRNL