5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', Benzimidazole derivative complex
DOI:10.2210/pdb445d/pdb   NDB ID: DD0006
445D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 7862.25
    Molecule: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
    Polymer: 1 Type: dna Length: 12
    Chains: A, B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IA
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    IA C25 H24 I N6
    2'-(3-IODOPHENYL)-5-(4-METHYL-1-PIPERAZINYL)- 2,5'-BI-BENZIMIDAZOLE
    IA:445D
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:DD0006
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Squire, C.J.,  Baker, L.J.,  Clark, G.R.,  Martin, R.F.,  White, J.

    Deposition:   1999-01-14
    Release:   2000-02-02
    Last Modified (REVDAT):   2010-08-04
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.60
    R-Value: 0.227 (obs.)
    R-Free: 0.246
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 25.38 α = 90.00 
    b = 40.71 β = 90.00 
    c = 66.24 γ = 90.00