429D

CRYSTAL STRUCTURE OF A LEADZYME; METAL BINDING AND IMPLICATIONS FOR CATALYSIS

Structural Biology Knowledgebase: 429D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.255

Literature

Macromolecules
Sequence Display for 429D

Classification: RNA

Total Structure Weight: 15514.21

Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*CP*GP*GP*AP*CP*CP*GP*AP*GP*CP*CP*AP*G)-3') A, C 13 synthetic
RNA (5'-R(*GP*CP*UP*GP*GP*GP*AP*GP*UP*CP*C)-3') B, D 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.255
  • Space Group: P 61 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 60.40 α = 90.00
b = 60.40 β = 90.00
c = 133.10 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1998-09-29
  • Released Date: 1999-03-01
  • Deposition author(s): Wedekind, J. E., McKay, D. B.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4