THE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)
DOI:10.2210/pdb426d/pdb   NDB ID: BD0004
426D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 7366.92
    Molecule: 5'-D(CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'
    Polymer: 1 Type: dna Length: 12
    Chains: A, B
    Details: FIRST CYTOSINE OF EACH CHAIN IS NOT VISIBLE IN THE ELECTRON DENSITY
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
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    CA Ca
    CALCIUM ION
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:BD0004
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Liu, J.,  Malinina, L.,  Subirana, J.A.

    Deposition:   1998-09-17
    Release:   1998-11-30
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   3.00
    R-Value: 0.193 (obs.)
    R-Free: 0.235
    Space Group: H 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 41.96 α = 90.00 
    b = 41.96 β = 90.00 
    c = 101.40 γ = 120.00