3LAN

Crystal structure of HIV-1 reverse transcriptase in complex with N1-butyl pyrimidinedione non-nucleoside inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.235

Literature

Macromolecules
Sequence Display for 3LAN

Classification: TRANSFERASE

Total Structure Weight: 130055.69

Macromolecule Entities
Molecule Chains Length Organism Details
HIV Reverse transcriptase A, B 560 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
KBT
Query on KBT

A 3-{[3-butyl-5-(1-methylethyl)-2,6-dioxo-1,2,3,6- tetrahydropyrimidin-4-yl]carbonyl}-5-methylbenzonitrile
C20 H23 N3 O3
PPJRWFFVCKGABJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.284
  • R-Value Work: 0.235
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 118.70 α = 90.00
b = 154.03 β = 90.00
c = 153.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-01-06
  • Released Date: 2010-02-23
  • Deposition author(s): Lansdon, E.B., Mitchell, M.L.

Revision History

  • Version 1_0: 2010-02-23

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance