3HD6

Crystal Structure of the Human Rhesus Glycoprotein RhCG

Structural Biology Knowledgebase: 3HD6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 3HD6

Classification: MEMBRANE PROTEIN TRANSPORT PROTEIN

Total Structure Weight: 54471.58

Macromolecule Entities
Molecule Chains Length Organism Details
Ammonium transporter Rh type C A 490 Homo sapiens Gene Name(s): RHCG Gene View C15orf6 CDRC2 PDRC2 RHGK
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Channels: Amt/Mep/Rh proteins

Protein Name: Human Rh C glycoprotein ammonia transporter


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BOG
Query on BOG

A B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.168
  • Space Group: P 63
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 99.83 α = 90.00
b = 99.83 β = 90.00
c = 101.08 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-05-06
  • Released Date: 2009-09-01
  • Deposition author(s): Gruswitz, F., Chaudhary, S., Ho, J.D., Pezeshki, B., Ho, C-.M., Stroud, R.M., Center for Structures of Membrane Proteins (CSMP)

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4