3FXA

Crystal structure of a putative sugar-phosphate isomerase (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 A resolution

Structural Biology Knowledgebase: 3FXA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.157
  • R-Value Work: 0.133

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3FXA

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 86637.34

Macromolecule Entities
Molecule Chains Length Organism Details
SIS domain protein A, B, C, D 201 Listeria monocytogenes Gene Name(s): LMOf2365_0531

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

B, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.157
  • R-Value Work: 0.133
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 57.94 α = 90.00
b = 57.94 β = 90.00
c = 197.96 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-20
  • Released Date: 2009-02-03
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4