3EK1

Crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308

Structural Biology Knowledgebase: 3EK1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3EK1

Classification: OXIDOREDUCTASE

Total Structure Weight: 431241.69

Macromolecule Entities
Molecule Chains Length Organism Details
Aldehyde dehydrogenase A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 504 Brucella abortus EC#: 1.2.1.16 IUBMB
Gene Name(s): gabD BAB1_1655
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MES
Query on MES

A, B, C, D, E, F, G, H 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D, E, F, G, H SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 91.87 α = 92.03
b = 93.01 β = 107.58
c = 143.70 γ = 109.65

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-18
  • Released Date: 2008-09-30
  • Deposition author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4