3E6I

Human cytochrome P450 2E1 in complex with the inhibitor indazole

Structural Biology Knowledgebase: 3E6I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.220

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3E6I

Classification: OXIDOREDUCTASE

Total Structure Weight: 111587.67

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome P450 2E1 A, B 476 Homo sapiens EC#: 1.14.13 IUBMB
Fragment: Residues 32-493
Gene Name(s): CYP2E1 Gene View CYP2E

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
LZ1
Query on LZ1

A, B 1H-indazole
C7 H6 N2
BAXOFTOLAUCFNW-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.220
  • Space Group: P 43
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 71.08 α = 90.00
b = 71.08 β = 90.00
c = 225.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-08-15
  • Released Date: 2008-09-23
  • Deposition author(s): Porubsky, P.R., Meneely, K.M., Scott, E.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4