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Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
 
 
DOI:10.2210/pdb3dmk/pdb
3DMK
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Cell Adhesion
    Structure Weight: 273863.94
     
    Molecule:Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
    Polymer:1Type:polypeptide(L)Length:816
    Chains:A, B, C
    Fragment:N-terminal Eight Ig Domains
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Drosophila melanogaster Go to NCBI Taxonomy entry Expression System: Trichoplusia ni  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 4
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    2V5M  Smaller fragment (N-terminal 4 Ig domains), Different isoform. 
    2V5R  Smaller fragment (N-terminal 4 Ig domains), Different isoform. 
    2V5S  Smaller fragment (N-terminal 4 Ig domains), Different isoform. 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    GOL     GLYCEROL C3 H8 O3 3DLigand Explorer Link out to Ligand Expos:GOL Link out to SuperLigands:GOL Link out to SuperHapten:GOL
    NAG     N-ACETYL-D-GLUCOSAMINE C8 H15 N O6 3DLigand Explorer Link out to Ligand Expos:NAG Link out to SuperLigands:NAG Link out to SuperHapten:NAG
    NDG     2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE C8 H15 N O6 3DLigand Explorer Link out to Ligand Expos:NDG Link out to SuperLigands:NDG Link out to SuperHapten:NDG
    SO4     SULFATE ION O4 S 3DLigand Explorer Link out to Ligand Expos:SO4 Link out to SuperLigands:SO4 Link out to SuperHapten:SO4
     
     
  •  
    Move Section Derived Data Hide
     
     
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< Biological Assembly 1    Help >
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Biological assembly 1 assigned by authors and generated by PISA (software)
 
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Sawaya, M.R.,   Wojtowicz, W.M.,   Eisenberg, D.,   Zipursky, S.L.

    Deposition:   2008-07-01
    Release:   2008-10-07
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 4.19
    R-Value: 0.282 (obs.)
    R-Free: 0.327
    Space Group: I 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 118.46 α = 90.00 
    b = 177.61 β = 90.00 
    c = 434.05 γ = 90.00