3BUN

Crystal structure of c-Cbl-TKB domain complexed with its binding motif in Sprouty4

Structural Biology Knowledgebase: 3BUN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.201

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3BUN

Classification: LIGASE / SIGNALING PROTEIN

Total Structure Weight: 39776.04

Macromolecule Entities
Molecule Chains Length Organism Details
13-meric peptide from Portein sprouty homolog 4 A 13 Homo sapiens Fragment: UNP residues 46-58, pTyr-53 phosphopeptide
Gene Name(s): SPRY4 Gene View
E3 ubiquitin-protein ligase CBL B 329 Homo sapiens EC#: 6.3.2 IUBMB
Fragment: c-Cbl TKB domain, CBL N-terminal, UNP residues 23-351
Gene Name(s): CBL Gene View CBL2 RNF55

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PTR
Query on PTR
A L-PEPTIDE LINKING C9 H12 N O6 P TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.201
  • Space Group: P 6
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 122.85 α = 90.00
b = 122.85 β = 90.00
c = 55.54 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-01-03
  • Released Date: 2008-02-26
  • Deposition author(s): Ng, C., Jackson, R.A., Buschdorf, J.P., Sun, Q., Guy, G.R., Sivaraman, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4