3BSE

Crystal structure analysis of a 16-base-pair B-DNA

  • Classification: DNA
  • Deposited: 2007-12-23 Released: 2008-12-23
  • Deposition author(s): Narayana, N.

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.221

Literature

Macromolecules
Sequence Display for 3BSE

Classification: DNA

Total Structure Weight: 11510.14

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*DA*DCP*DAP*DCP*DTP*DAP*DCP*DAP*DAP*DTP*DGP*DTP*DTP*DGP*DCP*DAP*DAP*DT)-3') A 18 synthetic
DNA (5'-D(*DG*DTP*DAP*DTP*DTP*DGP*DCP*DAP*DAP*DCP*DAP*DTP*DTP*DGP*DTP*DAP*DGP*DT)-3') B 18 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.221
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 38.74 α = 90.00
b = 38.74 β = 90.00
c = 161.33 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-12-23
  • Released Date: 2008-12-23
  • Deposition author(s): Narayana, N.

Revision History

  • Version 1_0: 2008-12-23

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance