3ZPL

Crystal structure of Sco3205, a MarR family transcriptional regulator from Streptomyces coelicolor, in complex with DNA

Structural Biology Knowledgebase: 3ZPL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.196
  • R-Value Work: 0.176

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZPL

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 110140.39


Macromolecule Entities
Molecule Chains Length Organism Details
PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REPRESSOR A, B, E, F 177 Streptomyces coelicolor Details: SYNTHETIC GENE WITH OPTIMISED CODON USAGE FOR E.COLI EXPRESSION. INCLUDES N-TERMINAL HIS-TAG OF SEQUENCE MHHHHHHENLYFQG APPENDED TO WILD-TYPE SEQUENCE. SEQUENCE NUMBERING IS RELATIVE TO THE WILD-TYPE SEQUENCE.
Gene Name(s): SCO3205
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*AP*AP*GP*AP*TP*TP*GP*AP*GP*AP*TP*CP*TP *CP*AP*AP*TP*CP*TP*TP*DT)-3' C, D, G, H 22 Unidentified

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, C, D PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.196
  • R-Value Work: 0.176
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 70.80 α = 90.00
b = 70.80 β = 90.00
c = 557.48 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-02-28
  • Released Date: 2013-07-17
  • Deposition author(s): Stevenson, C.E.M., Assaad, A., Lawson, D.M.

Revision History

  • 2013-08-21
    Type: Citation | Details: JRNL