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Crystal structure of Sco3205, a MarR family transcriptional regulator from Streptomyces coelicolor, in complex with DNA
DOI:10.2210/pdb3zpl/pdb   NDB ID: NA2549
3ZPL
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 110140.52
    Molecule: PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REPRESSOR
    Polymer: 1 Type: protein Length: 177
    Chains: A, B, E, F
    Details: SYNTHETIC GENE WITH OPTIMISED CODON USAGE FOR E.COLI EXPRESSION. INCLUDES N-TERMINAL HIS-TAG OF SEQUENCE MHHHHHHENLYFQG APPENDED TO WILD-TYPE SEQUENCE. SEQUENCE NUMBERING IS RELATIVE TO THE WILD-TYPE SEQUENCE.
    Organism: Streptomyces coelicolor
    Gene Name: SCO3205
    UniProtKB: Protein Feature View | Search PDB | Q9KYU1  
    Molecule: 5'-D(*AP*AP*AP*GP*AP*TP*TP*GP*AP*GP*AP*TP*CP*TP *CP*AP*AP*TP*CP*TP*TP*DT)-3'
    Polymer: 2 Type: dna Length: 22
    Chains: C, D, G, H
    Organism: unidentified
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Streptomyces coelicolor   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct (unidentified)   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    PO4
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    PO4 O4 P
    PHOSPHATE ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: NA2549
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Stevenson, C.E.M.,  Assaad, A.,  Lawson, D.M.

    Deposition:   2013-02-28
    Release:   2013-07-17
    Last Modified (REVDAT):   2013-08-21
     
  •   Revision History    Hide
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    2013-08-21
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.80
    R-Value: 0.177 (obs.)
    R-Free: 0.196
    Space Group: P 65
    Unit Cell:
      Length [Å] Angles [°]
    a = 70.80 α = 90.00 
    b = 70.80 β = 90.00 
    c = 557.48 γ = 120.00